Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRCA2P51587 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.75■□□□□ 0.43
BRCA2P51587 AC008764.6-201ENST00000595909 2069 ntBASIC17.75■□□□□ 0.43
BRCA2P51587 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
BRCA2P51587 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.74■□□□□ 0.43
BRCA2P51587 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.74■□□□□ 0.43
BRCA2P51587 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.74■□□□□ 0.43
BRCA2P51587 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 AP001063.1-201ENST00000568332 529 ntBASIC17.74■□□□□ 0.43
BRCA2P51587 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.74■□□□□ 0.43
BRCA2P51587 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BRCA2P51587 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 MIR4750-201ENST00000584564 56 ntBASIC17.74■□□□□ 0.43
BRCA2P51587 AC073352.2-201ENST00000609385 439 ntBASIC17.74■□□□□ 0.43
BRCA2P51587 HLA-C-210ENST00000640219 976 ntBASIC17.74■□□□□ 0.43
BRCA2P51587 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 AL662844.4-201ENST00000606367 2838 ntBASIC17.74■□□□□ 0.43
BRCA2P51587 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.74■□□□□ 0.43
BRCA2P51587 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRCA2P51587 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.74■□□□□ 0.43
BRCA2P51587 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BRCA2P51587 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.73■□□□□ 0.43
BRCA2P51587 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.73■□□□□ 0.43
BRCA2P51587 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.73■□□□□ 0.43
BRCA2P51587 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.73■□□□□ 0.43
BRCA2P51587 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.73■□□□□ 0.43
BRCA2P51587 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.73■□□□□ 0.43
BRCA2P51587 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.73■□□□□ 0.43
BRCA2P51587 AC134915.1-201ENST00000426461 574 ntBASIC17.73■□□□□ 0.43
BRCA2P51587 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 IQSEC3P1-201ENST00000538799 536 ntBASIC17.73■□□□□ 0.43
BRCA2P51587 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.73■□□□□ 0.43
BRCA2P51587 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 MIR4321-201ENST00000592276 80 ntBASIC17.73■□□□□ 0.43
BRCA2P51587 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.73■□□□□ 0.43
BRCA2P51587 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRCA2P51587 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.73■□□□□ 0.43
BRCA2P51587 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCA2P51587 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 BAATP1-201ENST00000412284 1225 ntBASIC17.72■□□□□ 0.43
BRCA2P51587 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCA2P51587 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.72■□□□□ 0.43
BRCA2P51587 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.72■□□□□ 0.43
BRCA2P51587 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.72■□□□□ 0.43
BRCA2P51587 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BRCA2P51587 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRCA2P51587 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
BRCA2P51587 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.72■□□□□ 0.43
BRCA2P51587 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRCA2P51587 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BRCA2P51587 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.72■□□□□ 0.43
BRCA2P51587 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 EEF1DP6-201ENST00000449232 372 ntBASIC17.72■□□□□ 0.43
BRCA2P51587 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.72■□□□□ 0.43
BRCA2P51587 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms