Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TNNI2P48788 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
TNNI2P48788 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TNNI2P48788 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNNI2P48788 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.12■□□□□ 0.65
TNNI2P48788 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TNNI2P48788 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.12■□□□□ 0.65
TNNI2P48788 AC092552.1-201ENST00000547243 906 ntBASIC19.12■□□□□ 0.65
TNNI2P48788 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.12■□□□□ 0.65
TNNI2P48788 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.12■□□□□ 0.65
TNNI2P48788 AC008735.3-201ENST00000596646 500 ntBASIC19.12■□□□□ 0.65
TNNI2P48788 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.12■□□□□ 0.65
TNNI2P48788 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.12■□□□□ 0.65
TNNI2P48788 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TNNI2P48788 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNNI2P48788 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.12■□□□□ 0.65
TNNI2P48788 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNNI2P48788 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.11■□□□□ 0.65
TNNI2P48788 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.11■□□□□ 0.65
TNNI2P48788 CDC14C-201ENST00000428251 1719 ntBASIC19.11■□□□□ 0.65
TNNI2P48788 GGT3P-204ENST00000453783 1664 ntBASIC19.11■□□□□ 0.65
TNNI2P48788 Z97205.2-201ENST00000564697 1639 ntBASIC19.11■□□□□ 0.65
TNNI2P48788 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TNNI2P48788 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 PCDHA12-202ENST00000613593 2588 ntBASIC19.11■□□□□ 0.65
TNNI2P48788 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TNNI2P48788 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.11■□□□□ 0.65
TNNI2P48788 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
TNNI2P48788 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.11■□□□□ 0.65
TNNI2P48788 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.11■□□□□ 0.65
TNNI2P48788 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.11■□□□□ 0.65
TNNI2P48788 KRT223P-202ENST00000449164 1292 ntBASIC19.11■□□□□ 0.65
TNNI2P48788 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TNNI2P48788 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.11■□□□□ 0.65
TNNI2P48788 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
TNNI2P48788 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.11■□□□□ 0.65
TNNI2P48788 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.11■□□□□ 0.65
TNNI2P48788 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TNNI2P48788 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNNI2P48788 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNNI2P48788 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNNI2P48788 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.1■□□□□ 0.65
TNNI2P48788 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
TNNI2P48788 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.1■□□□□ 0.65
TNNI2P48788 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.1■□□□□ 0.65
TNNI2P48788 KRT43P-201ENST00000434019 910 ntBASIC19.1■□□□□ 0.65
TNNI2P48788 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.1■□□□□ 0.65
TNNI2P48788 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.1■□□□□ 0.65
TNNI2P48788 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
TNNI2P48788 AC010319.3-201ENST00000597028 470 ntBASIC19.1■□□□□ 0.65
TNNI2P48788 COX11-210ENST00000639671 696 ntBASIC19.1■□□□□ 0.65
TNNI2P48788 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
TNNI2P48788 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.1■□□□□ 0.65
TNNI2P48788 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
TNNI2P48788 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.1■□□□□ 0.65
TNNI2P48788 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNNI2P48788 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNNI2P48788 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNNI2P48788 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNNI2P48788 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNNI2P48788 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms