Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.06■□□□□ 0.32
LHX1P48742 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX1P48742 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LHX1P48742 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX1P48742 MIR661-201ENST00000384842 89 ntBASIC17.06■□□□□ 0.32
LHX1P48742 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
LHX1P48742 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX1P48742 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX1P48742 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 AC044860.1-202ENST00000559481 777 ntBASIC17.06■□□□□ 0.32
LHX1P48742 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LHX1P48742 AC138761.1-201ENST00000584393 385 ntBASIC17.06■□□□□ 0.32
LHX1P48742 LINC02084-201ENST00000606069 1096 ntBASIC17.06■□□□□ 0.32
LHX1P48742 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX1P48742 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LHX1P48742 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LHX1P48742 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LHX1P48742 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.06■□□□□ 0.32
LHX1P48742 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LHX1P48742 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LHX1P48742 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
LHX1P48742 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX1P48742 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LHX1P48742 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX1P48742 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX1P48742 AL662844.4-201ENST00000606367 2838 ntBASIC17.05■□□□□ 0.32
LHX1P48742 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX1P48742 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LHX1P48742 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 SERBP1P5-201ENST00000510079 1181 ntBASIC17.05■□□□□ 0.32
LHX1P48742 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX1P48742 AC135586.1-201ENST00000539323 574 ntBASIC17.05■□□□□ 0.32
LHX1P48742 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LHX1P48742 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.05■□□□□ 0.32
LHX1P48742 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX1P48742 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 AC079328.2-201ENST00000561241 3354 ntBASIC17.05■□□□□ 0.32
LHX1P48742 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX1P48742 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX1P48742 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX1P48742 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 AC134407.2-201ENST00000625089 1978 ntBASIC17.04■□□□□ 0.32
LHX1P48742 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LHX1P48742 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LHX1P48742 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX1P48742 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms