Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
USP8P40818 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 AC006449.6-201ENST00000612330 2296 ntBASIC17.72■□□□□ 0.43
USP8P40818 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 AL596087.1-201ENST00000400979 1969 ntBASIC17.72■□□□□ 0.43
USP8P40818 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.72■□□□□ 0.43
USP8P40818 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 MIR940-201ENST00000401276 94 ntBASIC17.72■□□□□ 0.43
USP8P40818 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 POU5F1P6-201ENST00000466990 990 ntBASIC17.72■□□□□ 0.43
USP8P40818 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.72■□□□□ 0.43
USP8P40818 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 KRT19P2-202ENST00000557173 1012 ntBASIC17.72■□□□□ 0.43
USP8P40818 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
USP8P40818 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.72■□□□□ 0.43
USP8P40818 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.72■□□□□ 0.43
USP8P40818 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 AC005622.1-201ENST00000636801 1703 ntBASIC17.72■□□□□ 0.43
USP8P40818 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP8P40818 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.72■□□□□ 0.43
USP8P40818 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
USP8P40818 MED15P5-201ENST00000423150 992 ntBASIC17.71■□□□□ 0.43
USP8P40818 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.71■□□□□ 0.43
USP8P40818 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.71■□□□□ 0.43
USP8P40818 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 RNA5SP416-201ENST00000516838 111 ntBASIC17.71■□□□□ 0.43
USP8P40818 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 AC140113.2-201ENST00000604370 208 ntBASIC17.71■□□□□ 0.43
USP8P40818 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.71■□□□□ 0.43
USP8P40818 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
USP8P40818 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.71■□□□□ 0.43
USP8P40818 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.71■□□□□ 0.43
USP8P40818 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP8P40818 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
USP8P40818 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.71■□□□□ 0.42
USP8P40818 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP8P40818 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms