Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC4P35249 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC4P35249 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFC4P35249 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFC4P35249 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFC4P35249 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC4P35249 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFC4P35249 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.1■□□□□ 0.81
RFC4P35249 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 AC006033.1-201ENST00000440505 426 ntBASIC20.1■□□□□ 0.81
RFC4P35249 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.1■□□□□ 0.81
RFC4P35249 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.1■□□□□ 0.81
RFC4P35249 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 AC008687.7-202ENST00000637404 953 ntBASIC20.1■□□□□ 0.81
RFC4P35249 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFC4P35249 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC4P35249 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.1■□□□□ 0.81
RFC4P35249 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.1■□□□□ 0.81
RFC4P35249 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC4P35249 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.09■□□□□ 0.81
RFC4P35249 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC4P35249 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 AC068880.1-201ENST00000507289 2297 ntBASIC20.09■□□□□ 0.81
RFC4P35249 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFC4P35249 AC092506.1-202ENST00000401022 528 ntBASIC20.09■□□□□ 0.81
RFC4P35249 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 C2orf27AP3-201ENST00000434123 579 ntBASIC20.09■□□□□ 0.81
RFC4P35249 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.09■□□□□ 0.81
RFC4P35249 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.09■□□□□ 0.81
RFC4P35249 SLED1-202ENST00000512051 380 ntBASIC20.09■□□□□ 0.81
RFC4P35249 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.09■□□□□ 0.81
RFC4P35249 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFC4P35249 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC4P35249 AL354718.3-201ENST00000616414 581 ntBASIC20.09■□□□□ 0.81
RFC4P35249 CR382287.1-201ENST00000623954 586 ntBASIC20.09■□□□□ 0.81
RFC4P35249 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 AC009053.2-201ENST00000563701 2365 ntBASIC20.09■□□□□ 0.81
RFC4P35249 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFC4P35249 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.09■□□□□ 0.81
RFC4P35249 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC4P35249 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RFC4P35249 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
RFC4P35249 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC4P35249 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC4P35249 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
RFC4P35249 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 AL592424.1-201ENST00000563624 1536 ntBASIC20.08■□□□□ 0.81
RFC4P35249 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC4P35249 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.08■□□□□ 0.81
RFC4P35249 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.08■□□□□ 0.81
RFC4P35249 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC4P35249 POU5F1P6-201ENST00000466990 990 ntBASIC20.08■□□□□ 0.81
RFC4P35249 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms