Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA3P29320 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA3P29320 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA3P29320 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.79■□□□□ 0.12
EPHA3P29320 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.79■□□□□ 0.12
EPHA3P29320 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.79■□□□□ 0.12
EPHA3P29320 FAM210CP-201ENST00000445714 574 ntBASIC15.79■□□□□ 0.12
EPHA3P29320 AC136632.2-201ENST00000512891 861 ntBASIC15.79■□□□□ 0.12
EPHA3P29320 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA3P29320 AC008667.4-201ENST00000607370 168 ntBASIC15.79■□□□□ 0.12
EPHA3P29320 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA3P29320 AL121772.3-201ENST00000610840 674 ntBASIC15.79■□□□□ 0.12
EPHA3P29320 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA3P29320 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
EPHA3P29320 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA3P29320 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 AC087481.3-201ENST00000602886 1894 ntBASIC15.78■□□□□ 0.12
EPHA3P29320 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
EPHA3P29320 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
EPHA3P29320 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHA3P29320 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHA3P29320 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHA3P29320 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 MIR3652-201ENST00000579335 131 ntBASIC15.78■□□□□ 0.12
EPHA3P29320 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.78■□□□□ 0.12
EPHA3P29320 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
EPHA3P29320 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
EPHA3P29320 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA3P29320 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA3P29320 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms