Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 BX005266.1-201ENST00000473402 457 ntBASIC14.25□□□□□ -0.13
RAB3BP20337 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB3BP20337 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB3BP20337 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB3BP20337 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3BP20337 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RAB3BP20337 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB3BP20337 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3BP20337 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3BP20337 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB3BP20337 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3BP20337 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3BP20337 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3BP20337 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3BP20337 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3BP20337 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3BP20337 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB3BP20337 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 AC104076.2-201ENST00000448912 469 ntBASIC14.24□□□□□ -0.13
RAB3BP20337 TOB2P1-201ENST00000469761 992 ntBASIC14.24□□□□□ -0.13
RAB3BP20337 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB3BP20337 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB3BP20337 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3BP20337 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB3BP20337 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3BP20337 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3BP20337 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 AC106881.1-201ENST00000605849 3329 ntBASIC14.23□□□□□ -0.13
RAB3BP20337 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB3BP20337 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3BP20337 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB3BP20337 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB3BP20337 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 ARMC10P1-201ENST00000313754 855 ntBASIC14.23□□□□□ -0.13
RAB3BP20337 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3BP20337 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3BP20337 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB3BP20337 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3BP20337 TPSP2-201ENST00000561760 610 ntBASIC14.23□□□□□ -0.13
RAB3BP20337 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
RAB3BP20337 AL022326.1-202ENST00000641533 845 ntBASIC14.23□□□□□ -0.13
RAB3BP20337 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3BP20337 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB3BP20337 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3BP20337 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3BP20337 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms