Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.82■□□□□ 0.92
MS4A1P11836 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MS4A1P11836 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.82■□□□□ 0.92
MS4A1P11836 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MS4A1P11836 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 TNRC18P2-201ENST00000417666 2714 ntBASIC20.81■□□□□ 0.92
MS4A1P11836 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MS4A1P11836 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A1P11836 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A1P11836 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.81■□□□□ 0.92
MS4A1P11836 RARRES2P8-201ENST00000566335 367 ntBASIC20.81■□□□□ 0.92
MS4A1P11836 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.81■□□□□ 0.92
MS4A1P11836 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.81■□□□□ 0.92
MS4A1P11836 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A1P11836 AL589702.1-201ENST00000641229 1509 ntBASIC20.81■□□□□ 0.92
MS4A1P11836 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.81■□□□□ 0.92
MS4A1P11836 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.81■□□□□ 0.92
MS4A1P11836 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A1P11836 AKAP8P1-201ENST00000434743 1349 ntBASIC20.8■□□□□ 0.92
MS4A1P11836 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MS4A1P11836 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A1P11836 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MS4A1P11836 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A1P11836 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.8■□□□□ 0.92
MS4A1P11836 AC092865.6-201ENST00000642101 219 ntBASIC20.8■□□□□ 0.92
MS4A1P11836 FER1L4-210ENST00000615531 5998 ntBASIC20.8■□□□□ 0.92
MS4A1P11836 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
MS4A1P11836 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A1P11836 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.8■□□□□ 0.92
MS4A1P11836 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MS4A1P11836 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MS4A1P11836 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MS4A1P11836 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MS4A1P11836 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
MS4A1P11836 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.79■□□□□ 0.92
MS4A1P11836 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
MS4A1P11836 PPT1-215ENST00000641471 2368 ntBASIC20.79■□□□□ 0.92
MS4A1P11836 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
MS4A1P11836 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MS4A1P11836 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
MS4A1P11836 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.79■□□□□ 0.92
MS4A1P11836 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 HAUS4P1-201ENST00000406739 1145 ntBASIC20.79■□□□□ 0.92
MS4A1P11836 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.79■□□□□ 0.92
MS4A1P11836 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.79■□□□□ 0.92
MS4A1P11836 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.79■□□□□ 0.92
MS4A1P11836 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.79■□□□□ 0.92
MS4A1P11836 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.79■□□□□ 0.92
MS4A1P11836 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.79■□□□□ 0.92
MS4A1P11836 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MS4A1P11836 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms