Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD28P10747 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 GGT4P-201ENST00000623672 1708 ntBASIC12.66□□□□□ -0.38
CD28P10747 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 GNAQP1-201ENST00000444815 1067 ntBASIC12.66□□□□□ -0.38
CD28P10747 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 AC061975.2-201ENST00000581722 295 ntBASIC12.66□□□□□ -0.38
CD28P10747 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.66□□□□□ -0.38
CD28P10747 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD28P10747 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.66□□□□□ -0.38
CD28P10747 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 AC005915.1-201ENST00000624912 2018 ntBASIC12.66□□□□□ -0.38
CD28P10747 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 AC006538.1-201ENST00000567905 1585 ntBASIC12.65□□□□□ -0.38
CD28P10747 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.65□□□□□ -0.38
CD28P10747 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 AL512361.1-201ENST00000554200 418 ntBASIC12.65□□□□□ -0.38
CD28P10747 AC104794.3-201ENST00000566840 1248 ntBASIC12.65□□□□□ -0.38
CD28P10747 AC026979.3-201ENST00000607315 403 ntBASIC12.65□□□□□ -0.38
CD28P10747 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.65□□□□□ -0.38
CD28P10747 TNRC18P3-201ENST00000441896 2691 ntBASIC12.65□□□□□ -0.38
CD28P10747 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.65□□□□□ -0.38
CD28P10747 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CD28P10747 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms