Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINGO3P0C6S8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINGO3P0C6S8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.75■□□□□ 0.11
LINGO3P0C6S8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINGO3P0C6S8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINGO3P0C6S8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.74■□□□□ 0.11
LINGO3P0C6S8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 AC079781.3-201ENST00000449110 356 ntBASIC15.74■□□□□ 0.11
LINGO3P0C6S8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.74■□□□□ 0.11
LINGO3P0C6S8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 AC136621.1-201ENST00000624017 2304 ntBASIC15.73■□□□□ 0.11
LINGO3P0C6S8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 AC021087.4-201ENST00000563761 564 ntBASIC15.73■□□□□ 0.11
LINGO3P0C6S8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 MTDHP4-201ENST00000600287 670 ntBASIC15.73■□□□□ 0.11
LINGO3P0C6S8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 AC104692.2-201ENST00000603054 253 ntBASIC15.73■□□□□ 0.11
LINGO3P0C6S8 AL031008.1-201ENST00000619963 541 ntBASIC15.73■□□□□ 0.11
LINGO3P0C6S8 TP73-AS1-207ENST00000624167 988 ntBASIC15.73■□□□□ 0.11
LINGO3P0C6S8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.73■□□□□ 0.11
LINGO3P0C6S8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms