Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
HOXC6P09630 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HOXC6P09630 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC6P09630 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HOXC6P09630 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.11■□□□□ 0.49
HOXC6P09630 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.11■□□□□ 0.49
HOXC6P09630 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.11■□□□□ 0.49
HOXC6P09630 AC124283.3-201ENST00000570869 594 ntBASIC18.11■□□□□ 0.49
HOXC6P09630 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
HOXC6P09630 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HOXC6P09630 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
HOXC6P09630 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 AC106886.4-201ENST00000623557 2502 ntBASIC18.11■□□□□ 0.49
HOXC6P09630 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC6P09630 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC6P09630 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC6P09630 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HOXC6P09630 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC6P09630 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HOXC6P09630 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC6P09630 POU5F1P6-201ENST00000466990 990 ntBASIC18.1■□□□□ 0.49
HOXC6P09630 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC6P09630 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC6P09630 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HOXC6P09630 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXC6P09630 AP001889.1-201ENST00000525414 633 ntBASIC18.1■□□□□ 0.49
HOXC6P09630 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.1■□□□□ 0.49
HOXC6P09630 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC6P09630 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HOXC6P09630 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC6P09630 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC6P09630 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HOXC6P09630 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HOXC6P09630 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXC6P09630 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms