Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 MYO15B-237ENST00000642007 4893 ntBASIC12.37□□□□□ -0.43
TCRAP04437 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TCRAP04437 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TCRAP04437 HAUS4P1-201ENST00000406739 1145 ntBASIC12.37□□□□□ -0.43
TCRAP04437 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.37□□□□□ -0.43
TCRAP04437 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.37□□□□□ -0.43
TCRAP04437 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.37□□□□□ -0.43
TCRAP04437 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 MIR3180-1-201ENST00000580374 94 ntBASIC12.37□□□□□ -0.43
TCRAP04437 MIR3180-3-201ENST00000584616 94 ntBASIC12.37□□□□□ -0.43
TCRAP04437 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.37□□□□□ -0.43
TCRAP04437 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRAP04437 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRAP04437 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TCRAP04437 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRAP04437 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TCRAP04437 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRAP04437 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TCRAP04437 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TCRAP04437 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
TCRAP04437 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRAP04437 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRAP04437 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TCRAP04437 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
TCRAP04437 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 AL009178.2-201ENST00000597278 2719 ntBASIC12.36□□□□□ -0.43
TCRAP04437 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRAP04437 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms