Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC092919.2-201ENST00000623631 1645 ntBASIC15.33■□□□□ 0.04
MT-ND1P03886 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.33■□□□□ 0.04
MT-ND1P03886 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND1P03886 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ND1P03886 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND1P03886 SART3-203ENST00000546611 1184 ntBASIC15.33■□□□□ 0.04
MT-ND1P03886 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.33■□□□□ 0.04
MT-ND1P03886 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 AC091167.2-201ENST00000579581 588 ntBASIC15.33■□□□□ 0.04
MT-ND1P03886 MTDHP4-201ENST00000600287 670 ntBASIC15.33■□□□□ 0.04
MT-ND1P03886 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND1P03886 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ND1P03886 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ND1P03886 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND1P03886 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND1P03886 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 AC005622.1-201ENST00000636801 1703 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 AC020658.6-201ENST00000623564 1870 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND1P03886 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND1P03886 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND1P03886 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.32■□□□□ 0.04
MT-ND1P03886 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 SCARNA2-201ENST00000458748 420 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 SLC25A6P2-201ENST00000497974 877 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
MT-ND1P03886 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND1P03886 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 PRELID1P1-202ENST00000567272 903 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ND1P03886 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 REXO1L6P-202ENST00000619970 1078 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 AC004706.3-202ENST00000621574 984 ntBASIC15.32■□□□□ 0.04
MT-ND1P03886 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND1P03886 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND1P03886 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND1P03886 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ND1P03886 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms