Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.59■□□□□ 0.57
COL2A1P02458 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.59■□□□□ 0.57
COL2A1P02458 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL2A1P02458 DRD5P1-201ENST00000456605 1438 ntBASIC18.59■□□□□ 0.57
COL2A1P02458 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL2A1P02458 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.59■□□□□ 0.57
COL2A1P02458 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL2A1P02458 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.59■□□□□ 0.57
COL2A1P02458 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL2A1P02458 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL2A1P02458 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL2A1P02458 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL2A1P02458 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
COL2A1P02458 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
COL2A1P02458 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.59■□□□□ 0.57
COL2A1P02458 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COL2A1P02458 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.58■□□□□ 0.57
COL2A1P02458 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COL2A1P02458 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.58■□□□□ 0.57
COL2A1P02458 AL355864.2-201ENST00000447420 863 ntBASIC18.58■□□□□ 0.57
COL2A1P02458 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 BNIP3P42-201ENST00000454982 569 ntBASIC18.58■□□□□ 0.57
COL2A1P02458 CTBP2P5-201ENST00000454986 1264 ntBASIC18.58■□□□□ 0.57
COL2A1P02458 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 BNIP3P29-201ENST00000598302 571 ntBASIC18.58■□□□□ 0.57
COL2A1P02458 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.58■□□□□ 0.57
COL2A1P02458 AC011447.5-201ENST00000616168 564 ntBASIC18.58■□□□□ 0.57
COL2A1P02458 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.58■□□□□ 0.57
COL2A1P02458 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL2A1P02458 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
COL2A1P02458 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.58■□□□□ 0.56
COL2A1P02458 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL2A1P02458 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COL2A1P02458 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 AC092933.1-201ENST00000393644 945 ntBASIC18.58■□□□□ 0.56
COL2A1P02458 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.58■□□□□ 0.56
COL2A1P02458 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.58■□□□□ 0.56
COL2A1P02458 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL2A1P02458 FO681548.1-201ENST00000455617 1132 ntBASIC18.58■□□□□ 0.56
COL2A1P02458 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.58■□□□□ 0.56
COL2A1P02458 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL2A1P02458 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.58■□□□□ 0.56
COL2A1P02458 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.58■□□□□ 0.56
COL2A1P02458 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.58■□□□□ 0.56
COL2A1P02458 AC093813.1-201ENST00000605066 256 ntBASIC18.58■□□□□ 0.56
COL2A1P02458 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.58■□□□□ 0.56
COL2A1P02458 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL2A1P02458 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.57■□□□□ 0.56
COL2A1P02458 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL2A1P02458 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL2A1P02458 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.57■□□□□ 0.56
COL2A1P02458 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL2A1P02458 BAATP1-201ENST00000412284 1225 ntBASIC18.57■□□□□ 0.56
COL2A1P02458 RPL7P3-201ENST00000441388 714 ntBASIC18.57■□□□□ 0.56
COL2A1P02458 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
COL2A1P02458 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 KLF2P4-201ENST00000451959 1225 ntBASIC18.57■□□□□ 0.56
COL2A1P02458 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.57■□□□□ 0.56
COL2A1P02458 AC106760.1-201ENST00000508690 800 ntBASIC18.57■□□□□ 0.56
COL2A1P02458 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
COL2A1P02458 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.57■□□□□ 0.56
COL2A1P02458 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.57■□□□□ 0.56
COL2A1P02458 KRT90P-201ENST00000549264 1064 ntBASIC18.57■□□□□ 0.56
COL2A1P02458 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.57■□□□□ 0.56
COL2A1P02458 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL2A1P02458 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL2A1P02458 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.57■□□□□ 0.56
COL2A1P02458 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms