Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MT-CO1P00395 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-CO1P00395 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-CO1P00395 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.61■□□□□ 0.25
MT-CO1P00395 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MT-CO1P00395 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 ME2P1-201ENST00000426028 1970 ntBASIC16.61■□□□□ 0.25
MT-CO1P00395 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 MIR943-201ENST00000401286 94 ntBASIC16.61■□□□□ 0.25
MT-CO1P00395 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.61■□□□□ 0.25
MT-CO1P00395 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MT-CO1P00395 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MT-CO1P00395 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 FO538757.1-201ENST00000623083 1397 ntBASIC16.61■□□□□ 0.25
MT-CO1P00395 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-CO1P00395 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MT-CO1P00395 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-CO1P00395 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MT-CO1P00395 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
MT-CO1P00395 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
MT-CO1P00395 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
MT-CO1P00395 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.6■□□□□ 0.25
MT-CO1P00395 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 TREML5P-201ENST00000421694 576 ntBASIC16.6■□□□□ 0.25
MT-CO1P00395 AC055876.3-201ENST00000431496 288 ntBASIC16.6■□□□□ 0.25
MT-CO1P00395 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.6■□□□□ 0.25
MT-CO1P00395 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.6■□□□□ 0.25
MT-CO1P00395 AC140878.1-201ENST00000565277 250 ntBASIC16.6■□□□□ 0.25
MT-CO1P00395 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 AC138649.4-201ENST00000612222 287 ntBASIC16.6■□□□□ 0.25
MT-CO1P00395 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.6■□□□□ 0.25
MT-CO1P00395 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.6■□□□□ 0.25
MT-CO1P00395 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-CO1P00395 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 PCDHA1-201ENST00000378133 2726 ntBASIC16.6■□□□□ 0.25
MT-CO1P00395 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-CO1P00395 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
MT-CO1P00395 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.59■□□□□ 0.25
MT-CO1P00395 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MT-CO1P00395 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.59■□□□□ 0.25
MT-CO1P00395 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-CO1P00395 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-CO1P00395 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-CO1P00395 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.59■□□□□ 0.25
MT-CO1P00395 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-CO1P00395 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-CO1P00395 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-CO1P00395 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-CO1P00395 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.59■□□□□ 0.25
MT-CO1P00395 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.59■□□□□ 0.25
MT-CO1P00395 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms