Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX6O95503 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX6O95503 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX6O95503 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CBX6O95503 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX6O95503 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CBX6O95503 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX6O95503 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX6O95503 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
CBX6O95503 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX6O95503 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX6O95503 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 AC008735.5-201ENST00000623544 497 ntBASIC16.22■□□□□ 0.19
CBX6O95503 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX6O95503 AC069224.1-201ENST00000566372 1715 ntBASIC16.22■□□□□ 0.19
CBX6O95503 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX6O95503 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.21■□□□□ 0.19
CBX6O95503 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CBX6O95503 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBX6O95503 KRT8P49-201ENST00000604166 1432 ntBASIC16.21■□□□□ 0.19
CBX6O95503 SNX33P1-201ENST00000592116 1762 ntBASIC16.21■□□□□ 0.19
CBX6O95503 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 AC026748.1-201ENST00000624349 3251 ntBASIC16.21■□□□□ 0.19
CBX6O95503 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.21■□□□□ 0.19
CBX6O95503 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBX6O95503 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX6O95503 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX6O95503 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX6O95503 AC004967.1-201ENST00000453589 447 ntBASIC16.21■□□□□ 0.19
CBX6O95503 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.21■□□□□ 0.19
CBX6O95503 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX6O95503 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.21■□□□□ 0.19
CBX6O95503 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.21■□□□□ 0.19
CBX6O95503 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.21■□□□□ 0.19
CBX6O95503 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.21■□□□□ 0.19
CBX6O95503 AC025062.2-201ENST00000605477 670 ntBASIC16.21■□□□□ 0.19
CBX6O95503 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX6O95503 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 AL031731.1-201ENST00000642131 2094 ntBASIC16.21■□□□□ 0.19
CBX6O95503 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 AL512652.2-201ENST00000625156 1716 ntBASIC16.21■□□□□ 0.19
CBX6O95503 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBX6O95503 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX6O95503 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.21■□□□□ 0.19
CBX6O95503 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
CBX6O95503 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX6O95503 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CBX6O95503 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CBX6O95503 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX6O95503 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CBX6O95503 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX6O95503 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX6O95503 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CBX6O95503 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX6O95503 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX6O95503 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.2■□□□□ 0.18
CBX6O95503 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX6O95503 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms