Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 CICP17-201ENST00000418553 2377 ntBASIC10.94□□□□□ -0.66
SNCGO76070 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 DGCR9-201ENST00000609630 2415 ntBASIC10.93□□□□□ -0.66
SNCGO76070 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 AC073869.1-201ENST00000415574 2762 ntBASIC10.93□□□□□ -0.66
SNCGO76070 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC10.93□□□□□ -0.66
SNCGO76070 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC10.93□□□□□ -0.66
SNCGO76070 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC10.93□□□□□ -0.66
SNCGO76070 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC10.93□□□□□ -0.66
SNCGO76070 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 PFKL-212ENST00000628044 129 ntTSL 3 BASIC10.93□□□□□ -0.66
SNCGO76070 CABP2-204ENST00000636477 941 ntTSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SNCGO76070 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SNCGO76070 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
SNCGO76070 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 KRT18P5-201ENST00000436075 1291 ntBASIC10.92□□□□□ -0.66
SNCGO76070 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC10.92□□□□□ -0.66
SNCGO76070 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC10.92□□□□□ -0.66
SNCGO76070 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC10.92□□□□□ -0.66
SNCGO76070 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.92□□□□□ -0.66
SNCGO76070 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
SNCGO76070 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 AP000692.2-201ENST00000608391 879 ntBASIC10.92□□□□□ -0.66
SNCGO76070 MIR6786-201ENST00000616843 113 ntBASIC10.92□□□□□ -0.66
SNCGO76070 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SNCGO76070 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SNCGO76070 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms