Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 U91328.1-201ENST00000437528 223 ntBASIC15.66■□□□□ 0.1
SLC28A2O43868 AC087163.2-201ENST00000457299 853 ntBASIC15.66■□□□□ 0.1
SLC28A2O43868 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC28A2O43868 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.65■□□□□ 0.1
SLC28A2O43868 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 LINC02199-201ENST00000506655 2702 ntBASIC15.65■□□□□ 0.1
SLC28A2O43868 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC28A2O43868 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC28A2O43868 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC28A2O43868 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC28A2O43868 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC28A2O43868 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 AC017083.2-201ENST00000608069 979 ntBASIC15.65■□□□□ 0.1
SLC28A2O43868 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 ME2P1-201ENST00000426028 1970 ntBASIC15.65■□□□□ 0.1
SLC28A2O43868 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC28A2O43868 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 AC008677.1-201ENST00000519230 1561 ntBASIC15.65■□□□□ 0.1
SLC28A2O43868 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC28A2O43868 AL513523.2-202ENST00000427283 2040 ntBASIC15.65■□□□□ 0.1
SLC28A2O43868 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC28A2O43868 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC28A2O43868 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC28A2O43868 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
SLC28A2O43868 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
SLC28A2O43868 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SLC28A2O43868 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC28A2O43868 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC28A2O43868 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC28A2O43868 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC28A2O43868 FAM185BP-201ENST00000443595 716 ntBASIC15.64■□□□□ 0.09
SLC28A2O43868 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC28A2O43868 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC28A2O43868 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC28A2O43868 MPDU1-223ENST00000582151 728 ntBASIC15.64■□□□□ 0.09
SLC28A2O43868 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 AC099522.2-201ENST00000607001 744 ntBASIC15.64■□□□□ 0.09
SLC28A2O43868 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC28A2O43868 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms