Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP9BO43861 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP9BO43861 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP9BO43861 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP9BO43861 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP9BO43861 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP9BO43861 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP9BO43861 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP9BO43861 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 CYMP-203ENST00000474680 1263 ntBASIC16.82■□□□□ 0.28
ATP9BO43861 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP9BO43861 SLC25A39P2-201ENST00000537614 270 ntBASIC16.82■□□□□ 0.28
ATP9BO43861 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP9BO43861 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP9BO43861 AC015911.4-201ENST00000588022 1070 ntBASIC16.82■□□□□ 0.28
ATP9BO43861 AL355385.1-201ENST00000606123 409 ntBASIC16.82■□□□□ 0.28
ATP9BO43861 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP9BO43861 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP9BO43861 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP9BO43861 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP9BO43861 RBPMS2P1-201ENST00000437762 623 ntBASIC16.81■□□□□ 0.28
ATP9BO43861 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP9BO43861 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 RN7SL371P-201ENST00000578099 267 ntBASIC16.81■□□□□ 0.28
ATP9BO43861 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.81■□□□□ 0.28
ATP9BO43861 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP9BO43861 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP9BO43861 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP9BO43861 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP9BO43861 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms