Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.19□□□□□ -0.46
SNAI2O43623 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SNAI2O43623 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 AC079776.2-201ENST00000641154 1609 ntBASIC12.19□□□□□ -0.46
SNAI2O43623 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.19□□□□□ -0.46
SNAI2O43623 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SNAI2O43623 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
SNAI2O43623 AC104076.2-201ENST00000448912 469 ntBASIC12.19□□□□□ -0.46
SNAI2O43623 MINOS1P3-201ENST00000457048 203 ntBASIC12.19□□□□□ -0.46
SNAI2O43623 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.19□□□□□ -0.46
SNAI2O43623 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.19□□□□□ -0.46
SNAI2O43623 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.19□□□□□ -0.46
SNAI2O43623 AC114341.1-201ENST00000618070 349 ntBASIC12.19□□□□□ -0.46
SNAI2O43623 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.19□□□□□ -0.46
SNAI2O43623 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.19□□□□□ -0.46
SNAI2O43623 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.19□□□□□ -0.46
SNAI2O43623 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.19□□□□□ -0.46
SNAI2O43623 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNAI2O43623 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SNAI2O43623 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SNAI2O43623 PCGF3-213ENST00000620529 1899 ntBASIC12.19□□□□□ -0.46
SNAI2O43623 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
SNAI2O43623 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SNAI2O43623 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.18□□□□□ -0.46
SNAI2O43623 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SNAI2O43623 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.18□□□□□ -0.46
SNAI2O43623 CDC14C-201ENST00000428251 1719 ntBASIC12.18□□□□□ -0.46
SNAI2O43623 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.18□□□□□ -0.46
SNAI2O43623 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.18□□□□□ -0.46
SNAI2O43623 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.18□□□□□ -0.46
SNAI2O43623 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNAI2O43623 AC093827.2-201ENST00000512654 315 ntBASIC12.18□□□□□ -0.46
SNAI2O43623 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.18□□□□□ -0.46
SNAI2O43623 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.18□□□□□ -0.46
SNAI2O43623 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms