Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
CHD1O14646 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC25.46■■□□□ 1.67
CHD1O14646 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC25.46■■□□□ 1.67
CHD1O14646 AC025181.2-201ENST00000606994 802 ntBASIC25.46■■□□□ 1.67
CHD1O14646 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC25.46■■□□□ 1.67
CHD1O14646 REXO1L1P-202ENST00000608646 1974 ntBASIC25.46■■□□□ 1.67
CHD1O14646 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CHD1O14646 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC25.46■■□□□ 1.67
CHD1O14646 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC25.46■■□□□ 1.67
CHD1O14646 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHD1O14646 POM121L8P-201ENST00000417732 1281 ntBASIC25.46■■□□□ 1.67
CHD1O14646 POM121L9P-203ENST00000441984 1285 ntBASIC25.46■■□□□ 1.67
CHD1O14646 AC100850.1-201ENST00000506768 649 ntBASIC25.46■■□□□ 1.67
CHD1O14646 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC25.46■■□□□ 1.67
CHD1O14646 AL353770.1-201ENST00000614915 403 ntBASIC25.46■■□□□ 1.67
CHD1O14646 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
CHD1O14646 AL805961.1-203ENST00000641078 1258 ntBASIC25.46■■□□□ 1.67
CHD1O14646 AC009053.2-201ENST00000563701 2365 ntBASIC25.45■■□□□ 1.67
CHD1O14646 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CHD1O14646 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
CHD1O14646 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC25.45■■□□□ 1.66
CHD1O14646 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
CHD1O14646 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 AC026316.1-201ENST00000398900 414 ntBASIC25.45■■□□□ 1.66
CHD1O14646 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
CHD1O14646 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC25.45■■□□□ 1.66
CHD1O14646 AC020922.3-201ENST00000595064 547 ntBASIC25.45■■□□□ 1.66
CHD1O14646 ENPP7P14-201ENST00000621765 1040 ntBASIC25.45■■□□□ 1.66
CHD1O14646 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC25.45■■□□□ 1.66
CHD1O14646 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CHD1O14646 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC25.45■■□□□ 1.66
CHD1O14646 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHD1O14646 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD1O14646 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CHD1O14646 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD1O14646 CYP51A1P3-201ENST00000400072 1428 ntBASIC25.44■■□□□ 1.66
CHD1O14646 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHD1O14646 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD1O14646 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHD1O14646 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD1O14646 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC25.44■■□□□ 1.66
CHD1O14646 MIR4783-201ENST00000580343 82 ntBASIC25.44■■□□□ 1.66
CHD1O14646 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD1O14646 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC25.44■■□□□ 1.66
CHD1O14646 BX539320.1-201ENST00000623759 877 ntBASIC25.44■■□□□ 1.66
CHD1O14646 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD1O14646 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CHD1O14646 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD1O14646 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD1O14646 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CHD1O14646 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD1O14646 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD1O14646 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC25.43■■□□□ 1.66
CHD1O14646 AC078991.1-201ENST00000437297 610 ntBASIC25.43■■□□□ 1.66
CHD1O14646 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC25.43■■□□□ 1.66
CHD1O14646 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC25.43■■□□□ 1.66
CHD1O14646 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 AC012044.1-201ENST00000603431 297 ntBASIC25.43■■□□□ 1.66
CHD1O14646 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
CHD1O14646 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CHD1O14646 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 GNE-204ENST00000539208 2190 ntTSL 2 BASIC25.43■■□□□ 1.66
CHD1O14646 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC25.43■■□□□ 1.66
CHD1O14646 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
CHD1O14646 B9D1-203ENST00000395615 805 ntTSL 3 BASIC25.43■■□□□ 1.66
CHD1O14646 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 AL160314.3-201ENST00000556041 767 ntBASIC25.43■■□□□ 1.66
CHD1O14646 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
CHD1O14646 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHD1O14646 LINC01144-201ENST00000626198 1710 ntBASIC25.43■■□□□ 1.66
CHD1O14646 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC25.43■■□□□ 1.66
CHD1O14646 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
CHD1O14646 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD1O14646 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD1O14646 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD1O14646 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms