Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.71■□□□□ 0.11
UBFD1O14562 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.71■□□□□ 0.11
UBFD1O14562 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
UBFD1O14562 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.71■□□□□ 0.11
UBFD1O14562 AC009078.2-202ENST00000463353 338 ntBASIC15.71■□□□□ 0.11
UBFD1O14562 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.71■□□□□ 0.11
UBFD1O14562 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.71■□□□□ 0.11
UBFD1O14562 KRT19P2-202ENST00000557173 1012 ntBASIC15.71■□□□□ 0.11
UBFD1O14562 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
UBFD1O14562 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.71■□□□□ 0.11
UBFD1O14562 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
UBFD1O14562 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBFD1O14562 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
UBFD1O14562 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.71■□□□□ 0.1
UBFD1O14562 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.71■□□□□ 0.1
UBFD1O14562 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
UBFD1O14562 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.71■□□□□ 0.1
UBFD1O14562 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
UBFD1O14562 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.71■□□□□ 0.1
UBFD1O14562 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBFD1O14562 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
UBFD1O14562 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
UBFD1O14562 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.71■□□□□ 0.1
UBFD1O14562 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UBFD1O14562 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.7■□□□□ 0.1
UBFD1O14562 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
UBFD1O14562 AC034105.1-201ENST00000563488 319 ntBASIC15.7■□□□□ 0.1
UBFD1O14562 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.7■□□□□ 0.1
UBFD1O14562 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 AC105250.1-201ENST00000509378 2057 ntBASIC15.7■□□□□ 0.1
UBFD1O14562 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 TMBIM7P-203ENST00000641617 1718 ntBASIC15.7■□□□□ 0.1
UBFD1O14562 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.7■□□□□ 0.1
UBFD1O14562 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
UBFD1O14562 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBFD1O14562 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 AC092127.1-201ENST00000567093 3455 ntBASIC15.69■□□□□ 0.1
UBFD1O14562 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
UBFD1O14562 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.69■□□□□ 0.1
UBFD1O14562 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBFD1O14562 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms