Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
PCDHB13Q9Y5F0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AP000344.2-201ENST00000512987 629 ntBASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AC084121.4-201ENST00000641598 221 ntBASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AF228730.8-201ENST00000642140 221 ntBASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB13Q9Y5F0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 AC142381.1-201ENST00000426099 345 ntBASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 SETP12-201ENST00000514068 805 ntBASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 FOXO1B-201ENST00000504678 1527 ntBASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB13Q9Y5F0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB13Q9Y5F0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms