Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 INE1-201ENST00000456273 945 ntBASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 MIR8072-201ENST00000614241 80 ntBASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.46■□□□□ 0.54
SYNPO2Q9UMS6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.54
SYNPO2Q9UMS6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SYNPO2Q9UMS6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 GIMAP3P-201ENST00000495150 836 ntBASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 AC000095.1-201ENST00000603208 874 ntBASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 PCDHA12-202ENST00000613593 2588 ntBASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPO2Q9UMS6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 BRI3BPP1-201ENST00000594224 787 ntBASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 IGHV3-72-202ENST00000621503 303 ntBASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 AL596087.1-201ENST00000400979 1969 ntBASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYNPO2Q9UMS6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 FZD10-202ENST00000539839 3282 ntBASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SYNPO2Q9UMS6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms