Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GPCPD1Q9NPB8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPCPD1Q9NPB8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 AL033527.5-202ENST00000641632 1098 ntBASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
GPCPD1Q9NPB8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
GPCPD1Q9NPB8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
GPCPD1Q9NPB8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 AC006449.6-201ENST00000612330 2296 ntBASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 SERBP1P3-201ENST00000459980 809 ntBASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPCPD1Q9NPB8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 COX20P2-201ENST00000452636 358 ntBASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 AC135586.1-201ENST00000539323 574 ntBASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPCPD1Q9NPB8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms