Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 AC008677.1-201ENST00000519230 1561 ntBASIC15.33■□□□□ 0.05
NEUROD4Q9HD90 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 RPSAP43-201ENST00000402237 625 ntBASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 GPX1P2-201ENST00000429271 606 ntBASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NEUROD4Q9HD90 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AC007967.2-201ENST00000432613 625 ntBASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AC004967.1-201ENST00000453589 447 ntBASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PRYP6-201ENST00000514804 343 ntBASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 RNA5SP416-201ENST00000516838 111 ntBASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AC112191.1-201ENST00000523689 701 ntBASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AC027796.2-201ENST00000575326 344 ntBASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms