Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 GGTLC5P-201ENST00000617623 998 ntBASIC18.13■□□□□ 0.49
CBX8Q9HC52 AP000550.4-202ENST00000639755 178 ntBASIC18.13■□□□□ 0.49
CBX8Q9HC52 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.12■□□□□ 0.49
CBX8Q9HC52 AL445228.2-201ENST00000605589 952 ntBASIC18.12■□□□□ 0.49
CBX8Q9HC52 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX8Q9HC52 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX8Q9HC52 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 AC008608.2-201ENST00000606089 416 ntBASIC18.11■□□□□ 0.49
CBX8Q9HC52 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CBX8Q9HC52 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX8Q9HC52 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 CICP23-201ENST00000605013 2741 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 C18orf15-201ENST00000623680 2534 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 AC009090.5-201ENST00000624886 2285 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms