Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 AC245100.5-201ENST00000452108 331 ntBASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 AC004877.2-201ENST00000623941 599 ntBASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 AC073439.1-201ENST00000624121 1774 ntBASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 HLA-A-201ENST00000376802 1334 ntBASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRTM1Q9HBL6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 AC126177.1-201ENST00000547829 2218 ntBASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRTM1Q9HBL6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 AL596257.1-201ENST00000641463 2694 ntBASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 AC009078.2-202ENST00000463353 338 ntBASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms