Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 RPS2P28-201ENST00000314255 741 ntBASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 AL078644.1-201ENST00000609881 752 ntBASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 AC012183.1-201ENST00000625197 499 ntBASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 AP002414.3-201ENST00000589352 1468 ntBASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.46■□□□□ 0.23
PHACTR1Q9C0D0 AC087481.3-201ENST00000602886 1894 ntBASIC16.46■□□□□ 0.22
PHACTR1Q9C0D0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 AC002347.1-201ENST00000569543 541 ntBASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 AL009183.1-201ENST00000603760 355 ntBASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 AL589702.1-201ENST00000641229 1509 ntBASIC16.45■□□□□ 0.22
PHACTR1Q9C0D0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 AL513480.1-201ENST00000451731 511 ntBASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 AC012640.2-201ENST00000561606 901 ntBASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 AC117500.6-201ENST00000624871 588 ntBASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 AC105250.1-201ENST00000509378 2057 ntBASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PHACTR1Q9C0D0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHACTR1Q9C0D0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PHACTR1Q9C0D0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PHACTR1Q9C0D0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms