Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 CALR4P-201ENST00000431943 946 ntBASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 AC020763.4-201ENST00000623414 4170 ntBASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP4Q9C0A0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 AL645608.8-201ENST00000606034 2086 ntBASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 FAM197Y7-201ENST00000432892 766 ntBASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 Z93015.1-201ENST00000451718 390 ntBASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 AL022328.3-201ENST00000607943 679 ntBASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP4Q9C0A0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 GAPDHP40-201ENST00000505218 1006 ntBASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 RNA5SP423-201ENST00000517127 109 ntBASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 AC078819.1-201ENST00000547454 765 ntBASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 AC012085.1-201ENST00000548270 765 ntBASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CNTNAP4Q9C0A0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms