Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXP3Q9BZS1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 AC073347.1-201ENST00000421633 2643 ntBASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXP3Q9BZS1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 HCG4B-203ENST00000450128 991 ntBASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 AL078644.1-201ENST00000609881 752 ntBASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXP3Q9BZS1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms