Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM62Q9BVG3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 SPDYE17-201ENST00000412399 783 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 BANF1P1-201ENST00000553684 263 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 AL589739.1-201ENST00000607720 493 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 AC073592.8-201ENST00000624126 511 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 AC092364.2-201ENST00000596710 2692 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 FO538757.1-201ENST00000623083 1397 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 CYP4F24P-201ENST00000586049 1580 ntBASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM62Q9BVG3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TRIM62Q9BVG3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 AC011477.6-201ENST00000604980 1927 ntBASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 AL133215.2-201ENST00000609242 977 ntBASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM62Q9BVG3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 AL513523.2-202ENST00000427283 2040 ntBASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 KRT8P12-202ENST00000472924 1397 ntBASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 FO393414.2-201ENST00000405153 598 ntBASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 EEF1DP4-201ENST00000446006 880 ntBASIC16.82■□□□□ 0.28
TRIM62Q9BVG3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms