Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC10.79□□□□□ -0.68
LITAFQ99732 SNX5-210ENST00000481323 562 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 FGF14-AS2-201ENST00000606448 1074 ntBASIC10.79□□□□□ -0.68
LITAFQ99732 ITM2C-210ENST00000620962 501 ntBASIC10.79□□□□□ -0.68
LITAFQ99732 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 CLN6-221ENST00000637494 765 ntTSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LITAFQ99732 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LITAFQ99732 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.79□□□□□ -0.68
LITAFQ99732 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 BX640514.1-201ENST00000583223 1918 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 AL359183.1-201ENST00000623796 2132 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 NCF1C-201ENST00000438382 1427 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 PAWRP1-201ENST00000451083 565 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC10.78□□□□□ -0.68
LITAFQ99732 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 AC090192.1-201ENST00000517740 490 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
LITAFQ99732 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 COPE-211ENST00000600932 1144 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 AP000867.4-201ENST00000641616 219 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms