Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDCA3Q99618 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDCA3Q99618 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDCA3Q99618 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDCA3Q99618 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDCA3Q99618 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.64■□□□□ 0.25
CDCA3Q99618 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.64■□□□□ 0.25
CDCA3Q99618 KRT18P43-201ENST00000469825 1281 ntBASIC16.64■□□□□ 0.25
CDCA3Q99618 FAM86HP-204ENST00000513466 959 ntBASIC16.64■□□□□ 0.25
CDCA3Q99618 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AP001258.2-201ENST00000529891 490 ntBASIC16.64■□□□□ 0.25
CDCA3Q99618 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.64■□□□□ 0.25
CDCA3Q99618 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDCA3Q99618 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDCA3Q99618 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
CDCA3Q99618 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDCA3Q99618 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.63■□□□□ 0.25
CDCA3Q99618 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.63■□□□□ 0.25
CDCA3Q99618 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA3Q99618 MSTO2P-201ENST00000314835 1709 ntBASIC16.63■□□□□ 0.25
CDCA3Q99618 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDCA3Q99618 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA3Q99618 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA3Q99618 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA3Q99618 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDCA3Q99618 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.63■□□□□ 0.25
CDCA3Q99618 GNRHR2-203ENST00000581100 1187 ntBASIC16.63■□□□□ 0.25
CDCA3Q99618 AL118558.3-201ENST00000607414 1079 ntBASIC16.63■□□□□ 0.25
CDCA3Q99618 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.63■□□□□ 0.25
CDCA3Q99618 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.63■□□□□ 0.25
CDCA3Q99618 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDCA3Q99618 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDCA3Q99618 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA3Q99618 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.62■□□□□ 0.25
CDCA3Q99618 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CDCA3Q99618 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDCA3Q99618 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CDCA3Q99618 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA3Q99618 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA3Q99618 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.62■□□□□ 0.25
CDCA3Q99618 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 ZNF767P-206ENST00000513792 565 ntBASIC16.62■□□□□ 0.25
CDCA3Q99618 AC026410.3-201ENST00000514280 936 ntBASIC16.62■□□□□ 0.25
CDCA3Q99618 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDCA3Q99618 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.62■□□□□ 0.25
CDCA3Q99618 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.62■□□□□ 0.25
CDCA3Q99618 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.62■□□□□ 0.25
CDCA3Q99618 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDCA3Q99618 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms