Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 CRYGEP-201ENST00000412192 528 ntBASIC12.19□□□□□ -0.46
LINC00477Q96M19 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 AC108751.1-201ENST00000490852 363 ntBASIC12.19□□□□□ -0.46
LINC00477Q96M19 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 AC012640.2-201ENST00000561606 901 ntBASIC12.19□□□□□ -0.46
LINC00477Q96M19 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 AC022532.1-201ENST00000624563 1728 ntBASIC12.19□□□□□ -0.46
LINC00477Q96M19 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
LINC00477Q96M19 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00477Q96M19 AC092919.2-201ENST00000623631 1645 ntBASIC12.19□□□□□ -0.46
LINC00477Q96M19 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 HAUS4P1-201ENST00000406739 1145 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 VN2R19P-201ENST00000442399 1052 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 AC245100.5-201ENST00000452108 331 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 EMBP1-201ENST00000458200 901 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 KRT18P56-201ENST00000507275 550 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 UNC93B7-201ENST00000509439 705 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 AP002469.2-201ENST00000531724 424 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 AC012313.10-201ENST00000623509 926 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 AC117500.6-201ENST00000624871 588 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 FAM215A-202ENST00000632077 792 ntBASIC12.18□□□□□ -0.46
LINC00477Q96M19 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00477Q96M19 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00477Q96M19 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms