Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 AC105339.1-204ENST00000636249 355 ntBASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ALG1L5P-201ENST00000482043 771 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 AC069335.1-201ENST00000489972 472 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 AC055717.3-201ENST00000622967 595 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 BNIP3P1-202ENST00000550043 1585 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 AP3S2-216ENST00000617003 1561 ntBASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM5Q96HC4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM5Q96HC4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms