Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 EIF4HP1-201ENST00000453115 687 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 HIST2H2BC-201ENST00000498492 580 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 AC243562.2-201ENST00000561247 970 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 AL390961.4-201ENST00000623958 2535 ntBASIC17.36■□□□□ 0.37
TRIM43Q96BQ3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 FAM197Y7-201ENST00000432892 766 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 BX284668.4-201ENST00000453917 508 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 SCARNA20.5-201ENST00000516991 142 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AC078819.1-201ENST00000547454 765 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AC012085.1-201ENST00000548270 765 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AP006547.1-201ENST00000563435 692 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 BNIP3P1-202ENST00000550043 1585 ntBASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM43Q96BQ3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 AL662890.1-201ENST00000396818 632 ntBASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 AC004898.1-201ENST00000451057 766 ntBASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 MPRIPP1-201ENST00000452433 1089 ntBASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 SLED1-202ENST00000512051 380 ntBASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 MIR4722-201ENST00000578292 60 ntBASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM43Q96BQ3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms