Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 STARP1-201ENST00000397973 869 ntBASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 MPDU1-223ENST00000582151 728 ntBASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 AL031432.5-201ENST00000641059 760 ntBASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 AC087386.2-201ENST00000623212 4637 ntBASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00308Q8TCZ7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
LINC00308Q8TCZ7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AC008677.1-201ENST00000519230 1561 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AL020989.1-201ENST00000422979 469 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AC098590.1-201ENST00000468126 897 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AC009533.2-201ENST00000543664 586 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 MIR4651-201ENST00000582622 73 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AL353801.3-201ENST00000609898 542 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AC020765.3-201ENST00000613051 740 ntBASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00308Q8TCZ7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms