Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AC069335.1-201ENST00000489972 472 ntBASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 KRT8P23-201ENST00000560090 1207 ntBASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 AL355385.1-201ENST00000606123 409 ntBASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 AC105339.1-204ENST00000636249 355 ntBASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 AC084121.4-201ENST00000641598 221 ntBASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 AF228730.8-201ENST00000642140 221 ntBASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH19Q8TAB3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
PCDH19Q8TAB3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH19Q8TAB3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
PCDH19Q8TAB3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH19Q8TAB3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC134407.2-201ENST00000625089 1978 ntBASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 FAM220BP-201ENST00000377689 816 ntBASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AL592309.1-201ENST00000443127 649 ntBASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC022145.2-201ENST00000598203 171 ntBASIC16.7■□□□□ 0.26
PCDH19Q8TAB3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms