Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 AL365203.3-201ENST00000609742 2057 ntBASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC4Q8N9L1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 SPDYE17-201ENST00000412399 783 ntBASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 AL645939.2-201ENST00000427340 991 ntBASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC4Q8N9L1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 AC011477.6-201ENST00000604980 1927 ntBASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC4Q8N9L1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 MTND6P24-201ENST00000440466 518 ntBASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 KLF2P3-201ENST00000451977 1087 ntBASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.27□□□□□ -0.13
ZIC4Q8N9L1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms