Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 REXO1L8P-201ENST00000604378 1897 ntBASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 TSPY16P-201ENST00000449843 468 ntBASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 UGT1A2P-201ENST00000454886 866 ntBASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 AC027307.2-201ENST00000591252 911 ntBASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC33Q8N5R6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 SPDYE7P-202ENST00000420373 878 ntBASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 AC140878.1-201ENST00000565277 250 ntBASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC33Q8N5R6 AC026691.1-201ENST00000602502 2017 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms