Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX5Q8N196 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SIX5Q8N196 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.57■□□□□ 0.24
SIX5Q8N196 KRT8P39-201ENST00000396270 1433 ntBASIC16.57■□□□□ 0.24
SIX5Q8N196 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 TUBB1P2-201ENST00000422712 1306 ntBASIC16.57■□□□□ 0.24
SIX5Q8N196 TUBB1P1-201ENST00000503144 1300 ntBASIC16.57■□□□□ 0.24
SIX5Q8N196 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SIX5Q8N196 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SIX5Q8N196 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX5Q8N196 AC099336.1-201ENST00000417053 1171 ntBASIC16.57■□□□□ 0.24
SIX5Q8N196 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.57■□□□□ 0.24
SIX5Q8N196 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SIX5Q8N196 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX5Q8N196 NOC2LP2-201ENST00000407594 1944 ntBASIC16.57■□□□□ 0.24
SIX5Q8N196 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.56■□□□□ 0.24
SIX5Q8N196 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SIX5Q8N196 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 PCDHA12-202ENST00000613593 2588 ntBASIC16.56■□□□□ 0.24
SIX5Q8N196 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SIX5Q8N196 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.56■□□□□ 0.24
SIX5Q8N196 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AC013467.2-201ENST00000605472 835 ntBASIC16.56■□□□□ 0.24
SIX5Q8N196 RPSAP52-203ENST00000622976 1023 ntBASIC16.56■□□□□ 0.24
SIX5Q8N196 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX5Q8N196 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX5Q8N196 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SIX5Q8N196 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.55■□□□□ 0.24
SIX5Q8N196 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms