Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CHD1LQ86WJ1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHD1LQ86WJ1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD1LQ86WJ1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD1LQ86WJ1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 AC073347.1-201ENST00000421633 2643 ntBASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 FAM86C2P-203ENST00000528684 1004 ntBASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 LINC01225-203ENST00000563550 1244 ntBASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 AC092850.2-201ENST00000623821 2697 ntBASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHD1LQ86WJ1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 AC013268.4-201ENST00000637413 2228 ntBASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 MIR346-201ENST00000362234 95 ntBASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 KRT8P48-201ENST00000515599 1220 ntBASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 CICP13-201ENST00000422015 2789 ntBASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD1LQ86WJ1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SPCS2P4-201ENST00000436160 681 ntBASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 POLD2P1-201ENST00000511220 997 ntBASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 KRT18P58-201ENST00000527480 1120 ntBASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms