Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 AL512356.2-201ENST00000546955 174 ntBASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 AC004449.1-201ENST00000564240 433 ntBASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 AL592424.1-201ENST00000563624 1536 ntBASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 SPDYE7P-202ENST00000420373 878 ntBASIC15□□□□□ -0.01
NUP54Q7Z3B4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 AC026150.2-201ENST00000564693 1156 ntBASIC15□□□□□ -0.01
NUP54Q7Z3B4 RARRES2P9-201ENST00000565168 469 ntBASIC15□□□□□ -0.01
NUP54Q7Z3B4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 AC022188.1-201ENST00000620960 1664 ntBASIC15□□□□□ -0.01
NUP54Q7Z3B4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15□□□□□ -0.01
NUP54Q7Z3B4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP54Q7Z3B4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AL139400.1-201ENST00000366220 510 ntBASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 RNA5SP410-201ENST00000516285 106 ntBASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 NORAD-201ENST00000565493 5339 ntBASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP54Q7Z3B4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms