Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC004790.2-201ENST00000623588 572 ntBASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMARCD3Q6STE5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 AC018712.1-201ENST00000455767 687 ntBASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMARCD3Q6STE5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 RNU1-129P-201ENST00000384064 167 ntBASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 HNRNPDP1-201ENST00000439535 754 ntBASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 AC012640.2-201ENST00000561606 901 ntBASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 MIR3909-201ENST00000579518 119 ntBASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 U1.21-201ENST00000580816 167 ntBASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 TP73-AS1-207ENST00000624167 988 ntBASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
SMARCD3Q6STE5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMARCD3Q6STE5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMARCD3Q6STE5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms