Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01559Q495D7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01559Q495D7 SEPT7P7-201ENST00000420492 1301 ntBASIC12.32□□□□□ -0.44
LINC01559Q495D7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01559Q495D7 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.32□□□□□ -0.44
LINC01559Q495D7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01559Q495D7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01559Q495D7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01559Q495D7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01559Q495D7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC01559Q495D7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.32□□□□□ -0.44
LINC01559Q495D7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01559Q495D7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC01559Q495D7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 AC090774.4-201ENST00000578888 1372 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 DSTNP1-201ENST00000419906 465 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 OR52A4P-202ENST00000481634 799 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 OR52A4P-203ENST00000498233 1014 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 MIR4492-201ENST00000581627 80 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 MPDU1-223ENST00000582151 728 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 MTCO1P8-201ENST00000416914 1523 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01559Q495D7 CDC14C-201ENST00000428251 1719 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 LINC02447-202ENST00000501888 2146 ntBASIC12.31□□□□□ -0.44
LINC01559Q495D7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01559Q495D7 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 GPAA1P2-202ENST00000606848 1787 ntBASIC12.3□□□□□ -0.44
LINC01559Q495D7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.3□□□□□ -0.44
LINC01559Q495D7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 AC104076.2-201ENST00000448912 469 ntBASIC12.3□□□□□ -0.44
LINC01559Q495D7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01559Q495D7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC01559Q495D7 KRT17P6-201ENST00000453795 1220 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms