RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
LINC01953-201ENST00000426870 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
LINC01953-201ENST00000426870 SENP3Q9H4L4 574 aaPredicted RBP27.46■■□□□ 1.99
LINC01953-201ENST00000426870 PHF23Q9BUL5 403 aaPredicted RBP27.35■■□□□ 1.97
LINC01953-201ENST00000426870 FOXD1Q16676 465 aa25.39■■□□□ 1.66
LINC01953-201ENST00000426870 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
LINC01953-201ENST00000426870 ADRA2BP18089 450 aa24.23■■□□□ 1.47
LINC01953-201ENST00000426870 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
LINC01953-201ENST00000426870 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
LINC01953-201ENST00000426870 MSH5O43196 834 aa23.65■■□□□ 1.38
LINC01953-201ENST00000426870 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
LINC01953-201ENST00000426870 PPP4R3CPQ6ZMV5 832 aa22.27■■□□□ 1.16
LINC01953-201ENST00000426870 MAPK8IP2Q13387 824 aaPredicted RBP22.01■■□□□ 1.11
LINC01953-201ENST00000426870 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
LINC01953-201ENST00000426870 POTEDQ86YR6 584 aa21.81■■□□□ 1.08
LINC01953-201ENST00000426870 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
LINC01953-201ENST00000426870 CNKSR2Q8WXI2 1034 aa21.73■■□□□ 1.07
LINC01953-201ENST00000426870 KCNA4P22459 653 aa21.44■■□□□ 1.02
LINC01953-201ENST00000426870 RNF216Q9NWF9 866 aaPredicted RBP21.34■■□□□ 1.01
LINC01953-201ENST00000426870 HOXD11P31277 338 aaPredicted RBP21.27■■□□□ 1
LINC01953-201ENST00000426870 NPM3O75607 178 aaKnown RBP21.26■□□□□ 0.99
LINC01953-201ENST00000426870 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
LINC01953-201ENST00000426870 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
LINC01953-201ENST00000426870 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
LINC01953-201ENST00000426870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC01953-201ENST00000426870 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
LINC01953-201ENST00000426870 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
LINC01953-201ENST00000426870 C1QBPQ07021 282 aaKnown RBP19.97■□□□□ 0.79
LINC01953-201ENST00000426870 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
LINC01953-201ENST00000426870 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
LINC01953-201ENST00000426870 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
LINC01953-201ENST00000426870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
LINC01953-201ENST00000426870 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
LINC01953-201ENST00000426870 MYCNP04198 464 aaPredicted RBP19.74■□□□□ 0.75
LINC01953-201ENST00000426870 APLP2Q06481 763 aa19.68■□□□□ 0.74
LINC01953-201ENST00000426870 SAMD1Q6SPF0 538 aaPredicted RBP19.64■□□□□ 0.73
LINC01953-201ENST00000426870 ZBTB22O15209 634 aa19.63■□□□□ 0.73
LINC01953-201ENST00000426870 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
LINC01953-201ENST00000426870 CAPN15O75808 1086 aa19.48■□□□□ 0.71
LINC01953-201ENST00000426870 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
LINC01953-201ENST00000426870 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
LINC01953-201ENST00000426870 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
LINC01953-201ENST00000426870 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
LINC01953-201ENST00000426870 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
LINC01953-201ENST00000426870 DSG3P32926 999 aa19.09■□□□□ 0.65
LINC01953-201ENST00000426870 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
LINC01953-201ENST00000426870 ABCB7O75027 752 aa19.01■□□□□ 0.63
LINC01953-201ENST00000426870 POLA2Q14181 598 aa18.91■□□□□ 0.62
LINC01953-201ENST00000426870 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
LINC01953-201ENST00000426870 FBLN2P98095 1184 aa18.53■□□□□ 0.56
LINC01953-201ENST00000426870 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
LINC01953-201ENST00000426870 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
LINC01953-201ENST00000426870 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
LINC01953-201ENST00000426870 SPDYE2BA6NHP3 402 aa18.1■□□□□ 0.49
LINC01953-201ENST00000426870 SPDYE6P0CI01 402 aa18.1■□□□□ 0.49
LINC01953-201ENST00000426870 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
LINC01953-201ENST00000426870 AKT1S1Q96B36 256 aa18.01■□□□□ 0.47
LINC01953-201ENST00000426870 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
LINC01953-201ENST00000426870 SPDYE4A6NLX3 237 aa17.86■□□□□ 0.45
LINC01953-201ENST00000426870 SSUH2Q9Y2M2 353 aa17.85■□□□□ 0.45
LINC01953-201ENST00000426870 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
LINC01953-201ENST00000426870 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC01953-201ENST00000426870 FKBP8Q14318 412 aa17.66■□□□□ 0.42
LINC01953-201ENST00000426870 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
LINC01953-201ENST00000426870 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
LINC01953-201ENST00000426870 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
LINC01953-201ENST00000426870 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
LINC01953-201ENST00000426870 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
LINC01953-201ENST00000426870 PROM2Q8N271 834 aa17.41■□□□□ 0.38
LINC01953-201ENST00000426870 PRR29P0C7W0 189 aa17.4■□□□□ 0.38
LINC01953-201ENST00000426870 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC01953-201ENST00000426870 POTEHQ6S545 545 aa17.27■□□□□ 0.36
LINC01953-201ENST00000426870 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.36
LINC01953-201ENST00000426870 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
LINC01953-201ENST00000426870 PRKAR2AP13861 404 aaKnown RBP17.18■□□□□ 0.34
LINC01953-201ENST00000426870 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
LINC01953-201ENST00000426870 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
LINC01953-201ENST00000426870 MIER1Q8N108 512 aa17.02■□□□□ 0.32
LINC01953-201ENST00000426870 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
LINC01953-201ENST00000426870 CREBZFQ9NS37 354 aa17■□□□□ 0.31
LINC01953-201ENST00000426870 FARP1Q9Y4F1 1045 aaPredicted RBP16.93■□□□□ 0.3
LINC01953-201ENST00000426870 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC01953-201ENST00000426870 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
LINC01953-201ENST00000426870 HAX1O00165 279 aa16.87■□□□□ 0.29
LINC01953-201ENST00000426870 VASPP50552 380 aaPredicted RBP16.86■□□□□ 0.29
LINC01953-201ENST00000426870 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
LINC01953-201ENST00000426870 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
LINC01953-201ENST00000426870 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
LINC01953-201ENST00000426870 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
LINC01953-201ENST00000426870 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
LINC01953-201ENST00000426870 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
LINC01953-201ENST00000426870 IFNLR1Q8IU57 520 aaPredicted RBP16.55■□□□□ 0.24
LINC01953-201ENST00000426870 EVX2Q03828 476 aa16.52■□□□□ 0.24
LINC01953-201ENST00000426870 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
LINC01953-201ENST00000426870 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.24
LINC01953-201ENST00000426870 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
LINC01953-201ENST00000426870 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
LINC01953-201ENST00000426870 NUBP1P53384 320 aa16.48■□□□□ 0.23
LINC01953-201ENST00000426870 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
LINC01953-201ENST00000426870 ZNF579Q8NAF0 562 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms