RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
LINC01953-201ENST00000426870 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
LINC01953-201ENST00000426870 SENP3Q9H4L4 574 aaPredicted RBP27.46■■□□□ 1.99
LINC01953-201ENST00000426870 PHF23Q9BUL5 403 aaPredicted RBP27.35■■□□□ 1.97
LINC01953-201ENST00000426870 FOXD1Q16676 465 aa25.39■■□□□ 1.66
LINC01953-201ENST00000426870 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
LINC01953-201ENST00000426870 ADRA2BP18089 450 aa24.23■■□□□ 1.47
LINC01953-201ENST00000426870 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
LINC01953-201ENST00000426870 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
LINC01953-201ENST00000426870 MSH5O43196 834 aa23.65■■□□□ 1.38
LINC01953-201ENST00000426870 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
LINC01953-201ENST00000426870 PPP4R3CPQ6ZMV5 832 aa22.27■■□□□ 1.16
LINC01953-201ENST00000426870 MAPK8IP2Q13387 824 aaPredicted RBP22.01■■□□□ 1.11
LINC01953-201ENST00000426870 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
LINC01953-201ENST00000426870 POTEDQ86YR6 584 aa21.81■■□□□ 1.08
LINC01953-201ENST00000426870 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
LINC01953-201ENST00000426870 CNKSR2Q8WXI2 1034 aa21.73■■□□□ 1.07
LINC01953-201ENST00000426870 KCNA4P22459 653 aa21.44■■□□□ 1.02
LINC01953-201ENST00000426870 RNF216Q9NWF9 866 aaPredicted RBP21.34■■□□□ 1.01
LINC01953-201ENST00000426870 HOXD11P31277 338 aaPredicted RBP21.27■■□□□ 1
LINC01953-201ENST00000426870 NPM3O75607 178 aaKnown RBP21.26■□□□□ 0.99
LINC01953-201ENST00000426870 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
LINC01953-201ENST00000426870 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
LINC01953-201ENST00000426870 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
LINC01953-201ENST00000426870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC01953-201ENST00000426870 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
LINC01953-201ENST00000426870 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
LINC01953-201ENST00000426870 C1QBPQ07021 282 aaKnown RBP19.97■□□□□ 0.79
LINC01953-201ENST00000426870 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
LINC01953-201ENST00000426870 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
LINC01953-201ENST00000426870 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
LINC01953-201ENST00000426870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
LINC01953-201ENST00000426870 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
LINC01953-201ENST00000426870 MYCNP04198 464 aaPredicted RBP19.74■□□□□ 0.75
LINC01953-201ENST00000426870 APLP2Q06481 763 aa19.68■□□□□ 0.74
LINC01953-201ENST00000426870 SAMD1Q6SPF0 538 aaPredicted RBP19.64■□□□□ 0.73
LINC01953-201ENST00000426870 ZBTB22O15209 634 aa19.63■□□□□ 0.73
LINC01953-201ENST00000426870 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
LINC01953-201ENST00000426870 CAPN15O75808 1086 aa19.48■□□□□ 0.71
LINC01953-201ENST00000426870 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
LINC01953-201ENST00000426870 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
LINC01953-201ENST00000426870 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
LINC01953-201ENST00000426870 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
LINC01953-201ENST00000426870 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
LINC01953-201ENST00000426870 DSG3P32926 999 aa19.09■□□□□ 0.65
LINC01953-201ENST00000426870 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
LINC01953-201ENST00000426870 ABCB7O75027 752 aa19.01■□□□□ 0.63
LINC01953-201ENST00000426870 POLA2Q14181 598 aa18.91■□□□□ 0.62
LINC01953-201ENST00000426870 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
LINC01953-201ENST00000426870 FBLN2P98095 1184 aa18.53■□□□□ 0.56
LINC01953-201ENST00000426870 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
LINC01953-201ENST00000426870 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
LINC01953-201ENST00000426870 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
LINC01953-201ENST00000426870 SPDYE2BA6NHP3 402 aa18.1■□□□□ 0.49
LINC01953-201ENST00000426870 SPDYE6P0CI01 402 aa18.1■□□□□ 0.49
LINC01953-201ENST00000426870 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
LINC01953-201ENST00000426870 AKT1S1Q96B36 256 aa18.01■□□□□ 0.47
LINC01953-201ENST00000426870 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
LINC01953-201ENST00000426870 SPDYE4A6NLX3 237 aa17.86■□□□□ 0.45
LINC01953-201ENST00000426870 SSUH2Q9Y2M2 353 aa17.85■□□□□ 0.45
LINC01953-201ENST00000426870 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
LINC01953-201ENST00000426870 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC01953-201ENST00000426870 FKBP8Q14318 412 aa17.66■□□□□ 0.42
LINC01953-201ENST00000426870 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
LINC01953-201ENST00000426870 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
LINC01953-201ENST00000426870 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
LINC01953-201ENST00000426870 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
LINC01953-201ENST00000426870 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
LINC01953-201ENST00000426870 PROM2Q8N271 834 aa17.41■□□□□ 0.38
LINC01953-201ENST00000426870 PRR29P0C7W0 189 aa17.4■□□□□ 0.38
LINC01953-201ENST00000426870 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC01953-201ENST00000426870 POTEHQ6S545 545 aa17.27■□□□□ 0.36
LINC01953-201ENST00000426870 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.36
LINC01953-201ENST00000426870 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
LINC01953-201ENST00000426870 PRKAR2AP13861 404 aaKnown RBP17.18■□□□□ 0.34
LINC01953-201ENST00000426870 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
LINC01953-201ENST00000426870 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
LINC01953-201ENST00000426870 MIER1Q8N108 512 aa17.02■□□□□ 0.32
LINC01953-201ENST00000426870 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
LINC01953-201ENST00000426870 CREBZFQ9NS37 354 aa17■□□□□ 0.31
LINC01953-201ENST00000426870 FARP1Q9Y4F1 1045 aaPredicted RBP16.93■□□□□ 0.3
LINC01953-201ENST00000426870 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC01953-201ENST00000426870 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
LINC01953-201ENST00000426870 HAX1O00165 279 aa16.87■□□□□ 0.29
LINC01953-201ENST00000426870 VASPP50552 380 aaPredicted RBP16.86■□□□□ 0.29
LINC01953-201ENST00000426870 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
LINC01953-201ENST00000426870 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
LINC01953-201ENST00000426870 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
LINC01953-201ENST00000426870 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
LINC01953-201ENST00000426870 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
LINC01953-201ENST00000426870 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
LINC01953-201ENST00000426870 IFNLR1Q8IU57 520 aaPredicted RBP16.55■□□□□ 0.24
LINC01953-201ENST00000426870 EVX2Q03828 476 aa16.52■□□□□ 0.24
LINC01953-201ENST00000426870 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
LINC01953-201ENST00000426870 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.24
LINC01953-201ENST00000426870 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
LINC01953-201ENST00000426870 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
LINC01953-201ENST00000426870 NUBP1P53384 320 aa16.48■□□□□ 0.23
LINC01953-201ENST00000426870 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
LINC01953-201ENST00000426870 ZNF579Q8NAF0 562 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms