Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AC004987.2-201ENST00000395959 1148 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AL627223.1-201ENST00000416693 442 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AC005237.2-201ENST00000434368 219 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AC243562.2-201ENST00000561247 970 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 MIR3687-2-201ENST00000577708 61 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 MIR3687-1-201ENST00000614492 61 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RSPO1Q2MKA7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 AC092384.3-202ENST00000564646 2873 ntBASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 ALG1L8P-201ENST00000533887 760 ntBASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 AC055717.3-201ENST00000622967 595 ntBASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 CICP13-201ENST00000422015 2789 ntBASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO1Q2MKA7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 PKD1P1-201ENST00000458669 6805 ntBASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 AC092850.2-201ENST00000623821 2697 ntBASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO1Q2MKA7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms