Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 MTX1P1-201ENST00000440904 838 ntBASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 AC093433.1-201ENST00000458048 571 ntBASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 LINC00304-203ENST00000565008 1864 ntBASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 C1QBPP1-201ENST00000400117 770 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AC234644.1-201ENST00000406065 370 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 CNN2P8-201ENST00000421872 913 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AC093724.1-201ENST00000448659 1027 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 RPL13AP25-201ENST00000484130 612 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 AP001063.1-201ENST00000568332 529 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RSPO4Q2I0M5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AL355312.1-201ENST00000407115 2176 ntBASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms