Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
HSPG2P98160 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
HSPG2P98160 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 UBL5-208ENST00000593087 320 ntTSL 3 BASIC9.77□□□□□ -0.85
HSPG2P98160 AC244157.2-201ENST00000616239 1006 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC9.77□□□□□ -0.85
HSPG2P98160 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC9.77□□□□□ -0.85
HSPG2P98160 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC9.77□□□□□ -0.85
HSPG2P98160 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC9.77□□□□□ -0.85
HSPG2P98160 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC9.77□□□□□ -0.85
HSPG2P98160 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 ACKR1-201ENST00000368121 1240 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 DPM3-202ENST00000368399 517 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
HSPG2P98160 TISP43-201ENST00000409793 538 ntTSL 4 BASIC9.77□□□□□ -0.85
HSPG2P98160 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 AL354877.1-201ENST00000424412 413 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC9.77□□□□□ -0.85
HSPG2P98160 AC106794.1-201ENST00000506935 792 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
HSPG2P98160 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC9.77□□□□□ -0.85
HSPG2P98160 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 AMT-206ENST00000458307 1860 ntTSL 2 BASIC9.77□□□□□ -0.85
HSPG2P98160 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC9.77□□□□□ -0.85
HSPG2P98160 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC9.77□□□□□ -0.85
HSPG2P98160 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 AC010234.1-201ENST00000494599 870 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC9.77□□□□□ -0.85
HSPG2P98160 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC9.77□□□□□ -0.85
HSPG2P98160 AC087045.2-201ENST00000606279 1003 ntBASIC9.77□□□□□ -0.85
HSPG2P98160 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
HSPG2P98160 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC9.76□□□□□ -0.85
HSPG2P98160 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC9.76□□□□□ -0.85
HSPG2P98160 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
HSPG2P98160 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 AL162426.1-201ENST00000624141 743 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
HSPG2P98160 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
HSPG2P98160 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 AC078991.1-201ENST00000437297 610 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC9.76□□□□□ -0.85
HSPG2P98160 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 AC073413.1-201ENST00000603927 732 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.76□□□□□ -0.85
HSPG2P98160 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC9.76□□□□□ -0.85
HSPG2P98160 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC9.76□□□□□ -0.85
HSPG2P98160 AL603756.1-201ENST00000606511 2163 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 CRCP-204ENST00000398684 492 ntTSL 2 BASIC9.76□□□□□ -0.85
HSPG2P98160 MPV17-205ENST00000402310 906 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 AP001582.1-201ENST00000525856 295 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 AC243562.2-201ENST00000561247 970 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC9.76□□□□□ -0.85
HSPG2P98160 BNIP3P13-201ENST00000599968 566 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 AC007663.3-201ENST00000609632 465 ntBASIC9.76□□□□□ -0.85
HSPG2P98160 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HSPG2P98160 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC9.76□□□□□ -0.85
HSPG2P98160 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
HSPG2P98160 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.76□□□□□ -0.85
HSPG2P98160 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms